Histopathology-Genomics Multi-modal Structural Representation Learning for Data-Efficient Precision Oncology
**Kun Wu**, Zhiguo Jiang, Xinyu Zhu, Jun Shi, Yushan Zheng*
CV
Education
- Ph.D. in Pattern Recognition and Intelligent Systems, Beihang University, Beijing, China, 2021–Present
- B.Eng. in Software Engineering, Hefei University of Technology, Anhui, China, 2017–2021
Research experience
- 2021–Present: PhD Student, REMEX Lab, Beihang University
- Research on histopathology image analysis, digital pathology, representation learning, and self-supervised learning for gigapixel WSIs.
Skills
- Machine learning & deep learning
- Representation learning & self-supervised learning
- Medical / histopathology image analysis
- Python (PyTorch, NumPy, scientific computing)
Publications
Lifelong Content-based Histopathology Image Retrieval via Bilevel Coreset Selection and Distance Consistency Rehearsal
Xinyu Zhu, Zhiguo Jiang, **Kun Wu**, Jun Shi, Yushan Zheng*
Positional encoding-guided transformer-based multiple instance learning for histopathology whole slide images classification
Jun Shi, Dongdong Sun, **Kun Wu**, Zhiguo Jiang, Xue Kong, Wei Wang, Haibo Wu, Yushan Zheng
Pan-cancer histopathology WSI pre-training with position-aware masked autoencoder
**Kun Wu**, Zhiguo Jiang, Kunming Tang, Jun Shi, Fengying Xie, Wei Wang, Haibo Wu, Yushan Zheng*
Genomics-embedded histopathology whole slide image encoding for data-efficient survival prediction
**Kun Wu**, Zhiguo Jiang, Xinyu Zhu, Jun Shi, Yushan Zheng
Lifelong histopathology whole slide image retrieval via distance consistency rehearsal
Xinyu Zhu, Zhiguo Jiang, **Kun Wu**, Jun Shi, Yushan Zheng
Self-supervised representation distribution learning for reliable data augmentation in histopathology WSI classification
Kunming Tang, Zhiguo Jiang, **Kun Wu**, Jun Shi, Fengying Xie, Wei Wang, Haibo Wu, Yushan Zheng*
Partial-label contrastive representation learning for fine-grained biomarkers prediction from histopathology whole slide images
Yushan Zheng, **Kun Wu**, Jun Li, Kunming Tang, Jun Shi, Haibo Wu, Zhiguo Jiang, Wei Wang
Position-aware masked autoencoder for histopathology wsi representation learning
**Kun Wu**, Yushan Zheng, Jun Shi, Fengying Xie, Zhiguo Jiang